2023 Q3 Publications by GCIR members | July to September
Docquier M, Nouspikel T, Blouin JL, Abramowicz M, Seebach JD, Spoerl D.
Clin Exp Allergy. 2023 Oct 18. doi: 10.1111/cea.14413. Online ahead of print.
PMID: 37853996
SwissParam 2023: A Modern Web-Based Tool for Efficient Small Molecule Parametrization.
Bugnon M, Goullieux M, Röhrig UF, Perez MAS, Daina A, Michielin O, Zoete V.
J Chem Inf Model. 2023 Oct 18. doi: 10.1021/acs.jcim.3c01053. Online ahead of print.
PMID: 37853543
da Silva Lopes AM, Colomer-Lahiguera S, Darnac C, Giacomini S, Bugeia S, Gutknecht G, Spurrier-Bernard G, Cuendet M, Muet F, Aedo-Lopez V, Mederos N, Michielin O, Addeo A, Latifyan S, Eicher M.
JMIR Res Protoc. 2023 Oct 18;12:e48386. doi: 10.2196/48386.
PMID: 37851498
Riek M, Scherer A, Möller B, Ciurea A, von Mühlenen I, Gabay C, Kyburz D, Brulhart L, von Kempis J, Mueller RB, Hasler P, Strahm T, von Känel S, Zufferey P, Dudler J, Finckh A.
Sci Rep. 2023 Oct 18;13(1):17776. doi: 10.1038/s41598-023-44841-w.
PMID: 37853058
Novel targets for immune-checkpoint inhibition in cancer.
Borgeaud M, Sandoval J, Obeid M, Banna G, Michielin O, Addeo A, Friedlaender A.
Cancer Treat Rev. 2023 Nov;120:102614. doi: 10.1016/j.ctrv.2023.102614. Epub 2023 Aug 12. PMID: 37603905 Review.
Nanobody-based pannexin1 channel inhibitors reduce inflammation in acute liver injury.
Van Campenhout R, De Groof TWM, Kadam P, Kwak BR, Muyldermans S, Devoogdt N, Vinken M.
J Nanobiotechnology. 2023 Oct 11;21(1):371. doi: 10.1186/s12951-023-02137-1. PMID: 37821897
Risk Factors for Dehiscence of Operative Incisions in Newborns after Laparotomy.
Miholjcic TBS, Baud O, Iranmanesh P, Wildhaber BE.
Eur J Pediatr Surg. 2023 Oct 10. doi: 10.1055/s-0043-1771223. PMID: 37816380
Buhl T, Santibanez Santana M, Forkel S, Kromer C, Seidel J, Möbs C, Pfützner W, Pfeiffer S, Laubach HJ, Boehncke WH, Liebmann J, Born M, Schön MP.
J Dtsch Dermatol Ges. 2023 Oct 9. doi: 10.1111/ddg.15211. PMID: 37814388
Burkard T, Vallejo-Yagüe E, Lauper K, Finckh A, Hügle T, Burden AM.
RMD Open. 2023 Oct;9(4):e003396. doi: 10.1136/rmdopen-2023-003396. PMID: 37802600
Criado Santos N, Bouvet S, Cruz Cobo M, Mandavit M, Bermont F, Castelbou C, Mansour F, Azam M, Giordano F, Nunes-Hasler P.
Commun Biol. 2023 Oct 4;6(1):1008. doi: 10.1038/s42003-023-05382-0. PMID: 37794132
Malaria: moving beyond the search for magic bullets.
Levashina E, Soldati-Favre D, Waters AP, Frischknecht F, Rayner JC.
EMBO Mol Med. 2023 Oct 4:e18727. doi: 10.15252/emmm.202318727. PMID: 37789804
Deciphering calcium signals in cells and tissues with tailored probes and models.
Demaurex N.
J Physiol. 2023 Oct;601(19):4179-4181. doi: 10.1113/JP285037. Epub 2023 Sep 16. PMID: 37715737
Dendritic cells as shepherds of T cell immunity in cancer.
Pittet MJ, Di Pilato M, Garris C, Mempel TR.
Immunity. 2023 Oct 10;56(10):2218-2230. doi: 10.1016/j.immuni.2023.08.014. Epub 2023 Sep 13. PMID: 37708889 Review.
Epitope-engineered human hematopoietic stem cells are shielded from CD123-targeted immunotherapy.
Marone R, Landmann E, Devaux A, Lepore R, Seyres D, Zuin J, Burgold T, Engdahl C, Capoferri G, Dell'Aglio A, Larrue C, Simonetta F, Rositzka J, Rhiel M, Andrieux G, Gallagher DN, Schröder MS, Wiederkehr A, Sinopoli A, Do Sacramento V, Haydn A, Garcia-Prat L, Divsalar C, Camus A, Xu L, Bordoli L, Schwede T, Porteus M, Tamburini J, Corn JE, Cathomen T, Cornu TI, Urlinger S, Jeker LT.
J Exp Med. 2023 Dec 4;220(12):e20231235. doi: 10.1084/jem.20231235. Epub 2023 Sep 29. PMID: 37773046
NOX family NADPH oxidases in mammals: Evolutionary conservation and isoform-defining sequences.
Nazari B, Jaquet V, Krause KH.
Redox Biol. 2023 Oct;66:102851. doi: 10.1016/j.redox.2023.102851. Epub 2023 Aug 12. PMID: 37595375
Calcium storage in multivesicular endo-lysosome.
Scott CC, Wasnik V, Nunes-Hasler P, Demaurex N, Kruse K, Gruenberg J.
Phys Biol. 2023 Sep 28. doi: 10.1088/1478-3975/acfe6a. PMID: 37769681
Obstructive sleep apnea: a major risk factor for COVID-19 encephalopathy?
Breville G, Herrmann F, Adler D, Deffert C, Bommarito G, Stancu P, Accorroni A, Uginet M, Assal F, Tamisier R, Lalive PH, Pepin JL, Lövblad KO, Allali G.
BMC Neurol. 2023 Sep 27;23(1):340. doi: 10.1186/s12883-023-03393-2. PMID: 37752429
Identification of a miRNA multi-targeting therapeutic strategy in glioblastoma.
Bassot A, Dragic H, Haddad SA, Moindrot L, Odouard S, Corlazzoli F, Marinari E, Bomane A, Brassens A, Marteyn A, Hibaoui Y, Petty TJ, Chalabi-Dchar M, Larrouquere L, Zdobnov EM, Legrand N, Tamburini J, Lincet H, Castets M, Yebra M, Migliorini D, Dutoit V, Walker PR, Preynat-Seauve O, Dietrich PY, Cosset É.
Cell Death Dis. 2023 Sep 25;14(9):630. doi: 10.1038/s41419-023-06117-z. PMID: 37749143
Maas-Bauer K, Köhler N, Stell AV, Zwick M, Acharya S, Rensing-Ehl A, König C, Kroll J, Baker J, Koßmann S, Pradier A, Wang S, Docquier M, Lewis DB, Negrin RS, Simonetta F.
J Leukoc Biol. 2023 Sep 23:qiad113. doi: 10.1093/jleuko/qiad113. PMID: 37742056
Manuel O, Laager M, Hirzel C, Neofytos D, Walti LN, Hoenger G, Binet I, Schnyder A, Stampf S, Koller M, Mombelli M, Kim MJ, Hoffmann M, Koenig K, Hess C, Burgener AV, Cippà PE, Hübel K, Mueller TF, Sidler D, Dahdal S, Suter-Riniker F, Villard J, Zbinden A, Pantaleo G, Semmo N, Hadaya K, Enríquez N, Meylan PR, Froissart M, Golshayan D, Fehr T, Huynh-Do U, Pascual M, Van Delden C, Hirsch HH, Jüni P, Mueller NJ; Swiss Transplant Cohort Study (STCS).
Clin Infect Dis. 2023 Sep 22:ciad575. doi: 10.1093/cid/ciad575. PMID: 37738676
Reductive carboxylation epigenetically instructs T cell differentiation.
Jaccard A, Wyss T, Maldonado-Pérez N, Rath JA, Bevilacqua A, Peng JJ, Lepez A, Von Gunten C, Franco F, Kao KC, Camviel N, Martín F, Ghesquière B, Migliorini D, Arber C, Romero P, Ho PC, Wenes M.
Nature. 2023 Sep;621(7980):849-856. doi: 10.1038/s41586-023-06546-y. Epub 2023 Sep 20. PMID: 37730993
Jung E, Kraimps A, Dittmann S, Griesser T, Costafrolaz J, Mattenberger Y, Jurt S, Viollier PH, Sander P, Sievers S, Gademann K.
Chembiochem. 2023 Sep 20:e202300570. doi: 10.1002/cbic.202300570. PMID: 37728121
Lamouroux A, Tournier M, Iaculli D, Caufriez A, Rusiecka OM, Martin C, Bes V, Carpio LE, Girardin Y, Loris R, Tabernilla A, Molica F, Gozalbes R, Mayán MD, Vinken M, Kwak BR, Ballet S.
J Med Chem. 2023 Sep 28;66(18):13086-13102. doi: 10.1021/acs.jmedchem.3c01116. Epub 2023 Sep 13. PMID: 37703077
Catho G, Rosa Mangeret F, Sauvan V, Chraïti MN, Pfister R, Baud O, Harbarth S, Buetti N.
J Hosp Infect. 2023 Sep;139:6-10. doi: 10.1016/j.jhin.2023.06.011. Epub 2023 Jun 19. PMID: 37343772
Zabotti A, De Marco G, Gossec L, Baraliakos X, Aletaha D, Iagnocco A, Gisondi P, Balint PV, Bertheussen H, Boehncke WH, Damjanov NS, de Wit M, Errichetti E, Marzo-Ortega H, Protopopov M, Puig L, Queiro R, Ruscitti P, Savage L, Schett G, Siebert S, Stamm TA, Studenic P, Tinazzi I, Van den Bosch FE, van der Helm-van Mil A, Watad A, Smolen JS, McGonagle DG.
Ann Rheum Dis. 2023 Sep;82(9):1162-1170. doi: 10.1136/ard-2023-224148. Epub 2023 Jun 9. PMID: 37295926
Micheroli R, Kissling S, Bürki K, Möller B, Finckh A, Nissen MJ, Exer P, Bräm R, Kyburz D, Rubbert-Roth A, Andor M, Baraliakos X, de Hooge M, Distler O, Scherer A, Ciurea A.
Clin Rheumatol. 2023 Sep;42(9):2377-2385. doi: 10.1007/s10067-023-06662-0. Epub 2023 Jun 8. PMID: 37289315
van Boheemen L, Ter Wee MM, Falahee M, Filer A, van Beers-Tas M, Finckh A, Hensvold A, Raza K, van Schaardenburg D.
Scand J Rheumatol. 2023 Sep;52(5):460-467. doi: 10.1080/03009742.2022.2116806. Epub 2022 Sep 29. PMID: 36174085
Bridging the Gap: Immunotherapy in Progressive Multifocal Leukoencephalopathy: A New Hope?
Born T, Vassallo P, Golshayan D, Di Liberto G, Brouland JP, Egervari K, Merkler D, Du Pasquier RA, Bernard-Valnet R.
Neurology. 2023 Sep 26;101(13):e1382-e1386. doi: 10.1212/WNL.0000000000207533. Epub 2023 Jul 5. PMID: 37407265
Gonzalez-Cantero A, Boehncke WH, De Sutter J, Zamorano JL, Lambert J, Puig L.
J Eur Acad Dermatol Venereol. 2023 Sep;37(9):1697-1705. doi: 10.1111/jdv.19191. Epub 2023 Jun 1. PMID: 37259959
Hirschel J, Carlhan-Ledermann A, Ferraz C, Brand LA, Filippa M, Gentaz E, Lejeune F, Baud O.
Children (Basel). 2023 Aug 28;10(9):1469. doi: 10.3390/children10091469. PMID: 37761430
Cardoso Dos Santos LM, Avila Y, Schvartz D, Rougemont AL, Bochaton-Piallat ML, Ruchonnet-Metrailler I.
Front Med (Lausanne). 2023 Aug 29;10:1191205. doi: 10.3389/fmed.2023.1191205. eCollection 2023. PMID: 37706027
Falquet M, Su Z, Wyss T, Ercolano G, Trabanelli S, Jandus C.
iScience. 2023 Aug 24;26(9):107728. doi: 10.1016/j.isci.2023.107728. eCollection 2023 Sep 15. PMID: 37694139
Baud O, Lehert P; PREMILOC study group.
Pediatr Res. 2023 Aug 31. doi: 10.1038/s41390-023-02785-x. Online ahead of print. PMID: 37653218
Mombelli M, Neofytos D, Huynh-Do U, Sánchez-Céspedes J, Stampf S, Golshayan D, Dahdal S, Stirnimann G, Schnyder A, Garzoni C, Venzin RM, Magenta L, Schönenberger M, Walti L, Hirzel C, Munting A, Dickenmann M, Koller M, Aubert JD, Steiger J, Pascual M, Mueller TF, Schuurmans M, Berger C, Binet I, Villard J, Mueller NJ, Egli A, Cordero E, van Delden C, Manuel O; Swiss Transplant Cohort Study.
Clin Infect Dis. 2023 Aug 16:ciad477. doi: 10.1093/cid/ciad477. PMID: 37584344
Gander-Bui HTT, Schläfli J, Baumgartner J, Walthert S, Genitsch V, van Geest G, Galván JA, Cardozo C, Graham Martinez C, Grans M, Muth S, Bruggmann R, Probst HC, Gabay C, Freigang S.
Immunity. 2023 Aug 8;56(8):1743-1760.e9. doi: 10.1016/j.immuni.2023.06.023. Epub 2023 Jul 20. PMID: 37478856
Wnt-Independent SARS-CoV-2 Infection in Pulmonary Epithelial Cells.
Koval A, Xu J, Williams N, Schmolke M, Krause KH, Katanaev VL.
Microbiol Spectr. 2023 Aug 17;11(4):e0482722. doi: 10.1128/spectrum.04827-22. Epub 2023 Jun 27. PMID: 37367224
Courlet P, Abler D, Guidi M, Girard P, Amato F, Vietti Violi N, Dietz M, Guignard N, Wicky A, Latifyan S, De Micheli R, Jreige M, Dromain C, Csajka C, Prior JO, Venkatakrishnan K, Michielin O, Cuendet MA, Terranova N.
CPT Pharmacometrics Syst Pharmacol. 2023 Aug;12(8):1170-1181. doi: 10.1002/psp4.12983. Epub 2023 Jun 16. PMID: 37328961
Neoadjuvant Immunotherapy: A Promising New Standard of Care.
Boydell E, Sandoval JL, Michielin O, Obeid M, Addeo A, Friedlaender A.
Int J Mol Sci. 2023 Jul 24;24(14):11849. doi: 10.3390/ijms241411849. PMID: 37511609. Review.
The potential role of the microbiota in prostate cancer pathogenesis and treatment.
Pernigoni N, Guo C, Gallagher L, Yuan W, Colucci M, Troiani M, Liu L, Maraccani L, Guccini I, Migliorini D, de Bono J, Alimonti A.
Nat Rev Urol. 2023 Jul 25. doi: 10.1038/s41585-023-00795-2. Online ahead of print. PMID: 37491512 Review.
Tournier BB, Sorce S, Marteyn A, Ghidoni R, Benussi L, Binetti G, Herrmann FR, Krause KH, Zekry D.
Alzheimers Dement. 2023 Jul 25. doi: 10.1002/alz.13392. PMID: 37489764
Methionine oxidation selectively enhances T-cell reactivity against a melanoma antigen.
Chiriţoiu GN, Munteanu CVA, Şulea TA, Spiridon L, Petrescu AJ, Jandus C, Romero P, Petrescu ŞM.
iScience. 2023 Jun 25;26(7):107205. doi: 10.1016/j.isci.2023.107205. eCollection 2023 Jul 21. PMID: 37485346
Lamacchia C, Gilbert B, Studer O, Lauper K, Finckh A.
Front Med (Lausanne). 2023 Jul 7;10:1201425. doi: 10.3389/fmed.2023.1201425. eCollection 2023. PMID: 37484859
da Silva Lopes AM, Colomer-Lahiguera S, Darnac C, Giacomini S, Bugeia S, Gutknecht G, Spurrier-Bernard G, Aedo-Lopez V, Mederos N, Latifyan S, Addedo A, Michielin O, Eicher M.
Support Care Cancer. 2023 Jul 22;31(8):484. doi: 10.1007/s00520-023-07934-w.
PMID: 37480546. Clinical Trial.
HLA variants and TCR diversity against SARS-CoV-2 in the pre-COVID-19 era.
Buhler S, Sollet ZC, Bettens F, Schäfer A, Ansari M, Ferrari-Lacraz S, Villard J.
HLA. 2023 Jul 18. doi: 10.1111/tan.15158. PMID: 37461808
A JAK Inhibitor for Treatment of Rheumatoid Arthritis: The Baricitinib Experience.
Taylor PC, Laedermann C, Alten R, Feist E, Choy E, Haladyj E, De La Torre I, Richette P, Finckh A, Tanaka Y.
J Clin Med. 2023 Jul 6;12(13):4527. doi: 10.3390/jcm12134527. PMID: 37445562 Review.
Cacialli P, Dogan S, Linnerz T, Pasche C, Bertrand JY.
Stem Cell Reports. 2023 Jul 11;18(7):1534-1546. doi: 10.1016/j.stemcr.2023.05.022. PMID: 37437546
Lee WL, Sinha A, Lam LN, Loo HL, Liang J, Ho P, Cui L, Chan CSC, Begley T, Kline KA, Dedon P.
Nat Commun. 2023 Jul 11;14(1):4093. doi: 10.1038/s41467-023-39790-x. PMID: 37433804
Tai YH, Engels D, Locatelli G, Emmanouilidis I, Fecher C, Theodorou D, Müller SA, Licht-Mayer S, Kreutzfeldt M, Wagner I, de Mello NP, Gkotzamani SN, Trovò L, Kendirli A, Aljović A, Breckwoldt MO, Naumann R, Bareyre FM, Perocchi F, Mahad D, Merkler D, Lichtenthaler SF, Kerschensteiner M, Misgeld T.
Nat Metab. 2023 Aug;5(8):1364-1381. doi: 10.1038/s42255-023-00838-3. Epub 2023 Jul 10. PMID: 37430025
Restoring tumor immunogenicity with dendritic cell reprogramming.
Zimmermannova O, Ferreira AG, Ascic E, Velasco Santiago M, Kurochkin I, Hansen M, Met Ö, Caiado I, Shapiro IE, Michaux J, Humbert M, Soto-Cabrera D, Benonisson H, Silvério-Alves R, Gomez-Jimenez D, Bernardo C, Bauden M, Andersson R, Höglund M, Miharada K, Nakamura Y, Hugues S, Greiff L, Lindstedt M, Rosa FF, Pires CF, Bassani-Sternberg M, Svane IM, Pereira CF.
Sci Immunol. 2023 Jul 14;8(85):eadd4817. doi: 10.1126/sciimmunol.add4817. Epub 2023 Jul 7. PMID: 37418548
Kaba M, Carreras-Sureda A, Nunes-Hasler P, Demaurex N.
J Cell Sci. 2023 Jul 15;136(14):jcs260902. doi: 10.1242/jcs.260902. Epub 2023 Jul 24. PMID: 37376972
Sabatier M, Birsen R, Lauture L, Mouche S, Angelino P, Dehairs J, Goupille L, Boussaid I, Heiblig M, Boet E, Sahal A, Saland E, Santos JC, Armengol M, Fernández-Serrano M, Farge T, Cognet G, Simonetta F, Pignon C, Graffeuil A, Mazzotti C, Avet-Loiseau H, Delos O, Bertrand-Michel J, Chedru A, Dembitz V, Gallipoli P, Anstee NS, Loo S, Wei AH, Carroll M, Goubard A, Castellano R, Collette Y, Vergez F, Mansat-De Mas V, Bertoli S, Tavitian S, Picard M, Récher C, Bourges-Abella N, Granat F, Kosmider O, Sujobert P, Colsch B, Joffre C, Stuani L, Swinnen JV, Guillou H, Roué G, Hakim N, Dejean AS, Tsantoulis P, Larrue C, Bouscary D, Tamburini J, Sarry JE.
Cancer Discov. 2023 Jul 7;13(7):1720-1747. doi: 10.1158/2159-8290.CD-22-0411. PMID: 37012202
Gigante B, Levy JH, van Gorp E, Bartoloni A, Bochaton-Piallat ML, Bäck M, Ten Cate H, Christersson C, Ferreiro JL, Geisler T, Lutgens E, Schulman S, Storey RF, Thachil J, Vilahur G, Liaw PC, Rocca B.
Eur Heart J. 2023 Aug 22;44(32):3040-3058. doi: 10.1093/eurheartj/ehad388. PMID: 37439553
Sartoretti J, Fontannaz P, Martinez de Tejada B, Othenin-Girard V, Chilin A, Lemaître B, Blanchard-Rohner G, Siegrist CA, Eberhardt CS.
Clin Infect Dis. 2023 Aug 22;77(4):645-648. doi: 10.1093/cid/ciad227. PMID: 37073575
Mavromati M, Mavrakanas T, Jornayvaz FR, Schaller K, Fitsiori A, Vargas MI, Lobrinus JA, Merkler D, Egervari K, Philippe J, Leboulleux S, Momjian S.
Endocrine. 2023 Aug;81(2):340-348. doi: 10.1007/s12020-023-03400-z. Epub 2023 May 24. PMID: 37222882. Review.
Martinez M, Mageswaran SK, Guérin A, Chen WD, Thompson CP, Chavin S, Soldati-Favre D, Striepen B, Chang YW.
Nat Commun. 2023 Aug 9;14(1):4800. doi: 10.1038/s41467-023-40520-6. PMID: 37558667
Mitochondrial pannexin1 controls cardiac sensitivity to ischaemia/reperfusion injury.
Rusiecka OM, Molica F, Nielsen MS, Tollance A, Morel S, Frieden M, Chanson M, Boengler K, Kwak BR.
Cardiovasc Res. 2023 Aug 9:cvad120. doi: 10.1093/cvr/cvad120. PMID: 37556386
Finckh A, Ciurea A, Raptis CE, Rubbert-Roth A.
J Infect Dis. 2023 Aug 4;228(Suppl 1):S13-S23. doi: 10.1093/infdis/jiad148. PMID: 37539758
CXCL9:SPP1 macrophage polarity identifies a network of cellular programs that control human cancers.
Bill R, Wirapati P, Messemaker M, Roh W, Zitti B, Duval F, Kiss M, Park JC, Saal TM, Hoelzl J, Tarussio D, Benedetti F, Tissot S, Kandalaft L, Varrone M, Ciriello G, McKee TA, Monnier Y, Mermod M, Blaum EM, Gushterova I, Gonye ALK, Hacohen N, Getz G, Mempel TR, Klein AM, Weissleder R, Faquin WC, Sadow PM, Lin D, Pai SI, Sade-Feldman M, Pittet MJ.
Science. 2023 Aug 4;381(6657):515-524. doi: 10.1126/science.ade2292. Epub 2023 Aug 3. PMID: 37535729
Kint N, Viollier PH.
Cell Rep. 2023 Aug 29;42(8):112890. doi: 10.1016/j.celrep.2023.112890. Epub 2023 Jul 28. PMID: 37515768